FICHA · AUR

kallisto

Quantify abundances of transcripts from RNA-Seq data. doi:10.1038/nbt.3519

  • rna-seq-analysis-tool
  • CLI
  • SCIENCE
  • Launchable
  • Runs in terminal
official+codex · reviewed · Jun 1, 2026 description in en

Description

RNA-Seq reads can be quantified into transcript abundance estimates for bioinformatics analysis.

It is useful for researchers processing sequencing experiments before downstream statistics, visualization, or biological interpretation. Genomic and transcriptomic data can be sensitive, so keep sample metadata and outputs protected.

How to run

kallisto

Commands: kallisto

Permissions

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