FICHA · AUR
smoldyn
Particle-based biochemical simulator for modeling molecular diffusion, surface interactions, and chemical reactions.
- biochemical simulator
- CLI
- SCIENCE
- Launchable
- Runs in terminal
· official+codex · reviewed · Jun 4, 2026 description in en
Particle-based biochemical systems can be modeled for molecular diffusion, surface interactions, and chemical reactions. This package is useful for researchers and students running Smoldyn simulations locally. Scientific models depend on assumptions and parameters and should not be treated as clinical proof.
How to run
smoldyn
Commands: smoldyn
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