FICHA · AUR

star-cshl

STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays

  • RNA-seq aligner CLI
  • CLI
  • BIOINFORMATICS
  • RNA-SEQ
  • Launchable
  • Runs in terminal
official+codex · reviewed · Jun 4, 2026 description in en

Description

RNA-seq reads can be aligned to a reference genome with the STAR aligner from Cold Spring Harbor Laboratory. The package builds and installs `STAR` and `STARlong` plus default parameters and documentation. It is for bioinformatics pipelines and can process large genomic data sets on local storage.

How to run

STAR

Commands: STAR

Permissions

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